Skip to main content

boost.python: os.environ and LD_LIBRARY_PATH

This article is again about programming language, so if you are not interested in this area, see you next time.

My first python project is a test suite. I like Martin Fowler's articles, so, naturally, my first program is a test. My project is usually started with test, documentation, and interface design, yet incremental.

This is about python's os.environ and LD_LIBRARY_PATH. This is a follow up of the boost.python's story. My development environment is Linux, but later I have a plan to go to Windows also.

In python interpreter, we can change the environment variables through os.environ. For example, if you want to change the LD_LIBRARY_PATH:

  os.environ['LD_LIBRARY_PATH'] = '/some/directory/lib'

I thought this is all for LD_LIBRARY_PATH, but I hit a wall. My department policy doesn't allow to have administrator right and Internet access to the developers. Therefore, if I want to use something not in my computer, for example, boost or python, I first need to ask to get the source code, and need to think how to install the software locally. Under this environment, the setting of shared library path is important.

My project has the following directory structure.

    test_x +--+ pymodule +--+ mypython_binding_module.so
           +--+ testbase +--+ test_run.py
           +--+ boost144 +--+ lib +--+ ...
                                  +--+ libboost_python.so

The problem here is mypython_binding_module.so depends on libboost_python.so. LD_LIBRARY_PATH is an environment variable.  Since environment variable is program global and has implicit effect, I usually try to avoid to use them. But this time I need it and I try to set this in the python interpreter only.

Python interpreter can recognize mypython_binding_module.so as a python module, so I can set sys.path to import this module. But, mypython_binding_module.so depends on libboost_python.so, this can not be done by sys.path. dlopen() does this task. Therefore, I need to set LD_LIBRARY_PATH to load libboost_python.so.

 I set LD_LIBRARY_PATH by os.environ, however, this does not work. I first suspect, python's os module only tells the current environment variables, but actually did not change them. However, manual said python changed them.

The problem was at the dlopen(). dlopen()'s manual said, this only looks up the LD_LIBRARY_PATH when the program starts. The process changes the LD_LIBRARY_PATH, it doesn't affect the dlopen()'s behavior. This is understandable behavior considering the security.

Once I understood this, I changed the LD_LIBRARY_PATH through os.environ, then I created a child process. In this child process, LD_LIBRARY_PATH's change is effective as expected.

Here, os.environ can change the environment variables, but the function takes it or not is depends on the function. This is a simple thing, but, I don't realize for two days.

Yet, the problem of setting library path seems a common problem. I looked into the documentation (e.g., site module, etc.), I might miss something since I am only a beginner of python.

Comments

Popular posts from this blog

Why parallelogram area is |ad-bc|?

Here is my question. The area of parallelogram is the difference of these two rectangles (red rectangle - blue rectangle). This is not intuitive for me. If you also think it is not so intuitive, you might interested in my slides. I try to explain this for hight school students. Slides:  A bit intuitive (for me) explanation of area of parallelogram  (to my site, external link) . 

Geometric Multiplicity: eignvectors (2)

If eigenvectors of a matrix A are independent, it is a happy property. Because the matrix A can be diagonalized with a matrix S that column vectors are eigenvectors of A . For example, Why this is a happy property of A? Because I can find A's power easily. A^{10} is not a big deal. Because Λ is a diagonal matrix and power of a diagonal matrix is quite simple. A^{10} = SΛ^{10} S^{-1} Then, why if I want to compute power of A ? That is the same reason to find eigenvectors. Eigenvectors are a basis of a matrix. A matrix can be represented by a single scalar. I repeat this again. This is the happy point, a matrix becomes a scalar. What can be simpler than a scalar value. But, this is only possible when the matrix S's columns are independent. Because S^{-1} must be exist. Now I come back to my first question. Is the λ's multiplicity related with the number of eigenvectors? This time I found this has the name. Geometric multiplicity (GM): the number of in...

Tezuka Osamu's Black Jack, "Shrinking"

I like several novel authors. My first favorite author is probably Teduka, Osamu. I still love him. The list grows by adding Hoshi, Shinichi, Agatha Christie, Hermann Hesse, and so forth. My first favorite article of Tezuka was Atom as most of the (boy's) Tezuka fans did. But my favorite is Black Jack. I try to summarize one story, it is still quite vivid in my memory. I first read this story when I was 13 - 15 years old. I re-read it at least several times since Black Jack is composed of many short episodes. The title should be "ちぢむ (SHRINKING)" or it might be "縮む(Shrinking)". (It is not so convenient to translate this to English, since English does not have a system to say the exact same word in several ways. So I just simulate it with capital letters.) Black Jack is a genius surgeon, but he does not have the license. In short, his medical activity is illegal. His skill is top level in the world, but, the fee is also out-of-law expensive. In the story ...